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Introduction: What is YADAS?
An Introduction to YADAS
Todd L. Graves
1
Los Alamos National Laboratory
24 September 2008
This site ©Copyright 2003-2008 by Todd L. Graves.
Introduction: What is YADAS?
Where can I get YADAS?
Review of MCMC ideas
Some notes on object-oriented programming in Java
Installation instructions
The basics
DataFrame
ScalarFrame
MCMCParameter
BasicMCMCBond: how to express a model
LogDensity's and Likelihoods
ArgumentMakers
Example 1: One-Way Anova
Example 2: FunctionalArgument
Example 3: LinearModelArgument
Writing your own Likelihoods
Writing your own ArgumentMakers
Enhancing mixing
MCMCUpdate
MultipleParameterUpdates
Example 4: NewAddCommonPerturber
Example 5: NewOneUpOneDownPerturber
TunableMultipleParameterUpdate
Writing your own Perturbers
Writing your own Updates
Advanced topics and examples
FiniteUpdate, and Example 6: BetaBinomialExample
ReversibleJumpUpdate, MixtureBond, and Example 7: BinomialHypothesisTest
Example 8: AttritionLikelihood
Example 9: GenericSPSystem
Related Work
Future Work
Discussion
License agreement
Bibliography
About this document ...
Todd Graves 2008-09-24
